Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915445.1_cds_XP_016465252.1_58223
CDS Infomation

[gene=LOC107788108] [db_xref=GeneID:107788108] [protein=regulator of nonsense transcripts UPF3-like] [protein_id=XP_016465252.1] [location=complement(join(17263..17301,17397..17506,17938..18352,19684..19757,23915..24059,24602..24712,25655..25734,25886..25984,26074..26169,26422..26528,28879..29012))] [gbkey=CDS]
Sequence

ATGAAGAATCGGCGAACCAAAGTGGTTGTGCGGCACTTGCCGCCGACGCTTTCTCAGTCT
ACGCTTCTCGAGCAGGTTGATTCTCGCTTCGCTGGTCGGTACAACTGGTTCACTTTTCGC
CCCGGCAAGACCAGCCTGAAGCATCAAAGCTATTCAAGAGCCTATATTGACTTTAGAAAT
ACAGAAGATGTTATTGAGTTCGCTGAGTTCTTTGATGGGCACGTGTTTGTGAATGAGAAA
GGCACTCAGTTCAAAACAATTGTCGAGTATGCTCCTTCACAGCGTGTTCCAAAGCACTGG
TCCAAGAAGGATGCCCGTGAAGCGACCATACTGAAAGATCCTGAATATCTGGAGTTCCTT
GAATTTCTTGCAAAGCCCGTTGAGAATCTTCCAAGTGCTGAGATACAATTGGAGAGAAAA
GAGGCTGAACGAGCTGGCTCAGCAAAGGATGCTCCTATAGTTACTCCATTAATGGATTAT
ATACGTCAGAAAAGAGCTGCGAAGAGTGGAGCTCGGAGATCTATATCTAATGGAAGATCA
ACCAAAAGGGTTGGTGGCACATCCTCAAGAACTCCTAGCTCAGCTGCATCTAAACGAGGC
TCTGAAAAGAGGACTTCTACAACCATGTATGTTCTACGAGACAGTTCTAAGGCTGGAAAT
GGTAAGGACAAATCATACATTCTAGTGCCAAAACGTGATGATCAGCAGCTCTCTGACAAG
TCGAGAACCTCTGCTCCTGGATCTGGGATTGATTTAGTGGAAGGGGAAATTGGTCGTTCT
GTAACTGCTGATAGTGGGAAGAAGAAAATCCTGCTCTTGAAGGGGAAGGAAAAAGAAGGT
CCTAATGTTTCTGGTGGTTCATTAGCTCAACAGAATGTGGCATCTACTCTCAAGAATTCA
CCTAGTTCATCTGCTCCAAAACAGAACCAGCGCCAAGAGGCAAGTGGCAAGATCATCAGA
AGTATTCTTCTCAAGGATGCTCGGCAGAATCAATCAGCATCTCAGTCAGAGCATCAAATA
CAGGATAAGGACAAGAGACCTCCTCGGCCACCAAGTATGCAGTTGTTTCAGAAGGATACT
AGTGGAGCTAATGAGGATAAGGCCGCTGGAAATGACTTGCATGTTGTCCATGTTGAGAAG
CAAGAAAGACGTTCTAGGAATAGAGATAGGCCTGATCGTGGTGTTTGGGCTCCTCTTCGC
CGTGCTGATAGTTCACAGGCCAGTAATGAACAATCTTCCCAAGTGCGAGATTTTGTTGAA
GGTAACTATAAACATGGTAGTCGTCGTGGTTTGAGGGATGCAGATGGACCTTCTGTTGGG
GACGGAAAACCTGTGAGAAGGGGAGGTACTTCTGCCTACAGTTCTCTTGAGAAACAAGTG
TGGGTTCAAAAGTCAAGTTCTGGTTCTTAG

Peptide Sequence

PEP ID

XP_016465252.1
PEP Infomation

PREDICTED: regulator of nonsense transcripts UPF3-like [Nicotiana tabacum]
Sequence

MKNRRTKVVVRHLPPTLSQSTLLEQVDSRFAGRYNWFTFRPGKTSLKHQSYSRAYIDFRN
TEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDAREATILKDPEYLEFL
EFLAKPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARRSISNGRS
TKRVGGTSSRTPSSAASKRGSEKRTSTTMYVLRDSSKAGNGKDKSYILVPKRDDQQLSDK
SRTSAPGSGIDLVEGEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVASTLKNS
PSSSAPKQNQRQEASGKIIRSILLKDARQNQSASQSEHQIQDKDKRPPRPPSMQLFQKDT
SGANEDKAAGNDLHVVHVEKQERRSRNRDRPDRGVWAPLRRADSSQASNEQSSQVRDFVE
GNYKHGSRRGLRDADGPSVGDGKPVRRGGTSAYSSLEKQVWVQKSSSGS

Transcript Sequence

Gene sequence data has not been registered.